Morten Enemark Lund

Automation & extension tooling for the AnyBody Modeling System.

The AnyPyTools package provides a Python interface to automate multibody musculoskeletal model simulations in the AnyBody Modeling System. The main advantage of AnyPyTools is that it enables reproducible research for the AnyBody Modeling System, and bridges the gap to the whole ecosystem of open source scientific Python packages.

Workflow management for reproducible and scalable data analyses.

Snakemake is highly used in in the field of bioinformatics, but the system is usefull in all cases where data analysis workflows are involved. The Snakemake workflow management system is a tool to create reproducible and scalable data analyses. Workflows are described via a human readable, Python based language.

My contribution to snakemake was enabling windows support, which involved integration of the commandline systems on windows, and updating the snakemake test system to also handle windows tests. I am currently one of the 8 maintainers of the project.

Python-powered cross-platform shell (9K+ GitHub stars; Top 10 trending in 2020).

Xonsh is a modern, full-featured and cross-platform python shell. The language is a superset of Python 3.6+ with additional shell primitives that you are used to from Bash and IPython. It works on all major systems including Linux, OSX, and Windows. Xonsh is meant for the daily use of experts and novices.

It has been a while since I actively contributed, but I have previously I was one of the core-developers when xonsh was getting started, and mostly handled the Windows compatibility aspects.

• Administering the GitHub Enterprise platform, aligning roadmap priorities with developer needs and organizational governance requirements.
• Helping drive migration from Bitbucket to GitHub across the organization, including repository transition planning, workflow alignment, and adoption support.
• Owning and improving Python developer experience through tooling improvements, reusable workflows, and practical standards for day-to-day engineering work.
• Designing and facilitating workshops to raise Python tooling maturity and strengthen shared engineering practices across development teams.

• Orchestrated our Git platform journey over many years (Bitbucket/Jira → GitLab → Azure DevOps Server / GitHub), handled migration plans, branching policies, and onboarding across multiple large active repositories.
• Architected unified CI/CD platform (Azure Pipelines + GitHub Actions) consolidating builds for C++, Python tooling, and docs; automated artifact + installer assembly reducing release cycle from days to just ~25 minutes (commit→installer).
• Developed custom pytest plugin suite for model verification tests, integrating automated quality & regression checks into pipelines (developer feedback acceleration).
• Created multiple internal documentation portals with Sphinx + custom extensions & Pygments lexer generating manuals for AnyScript language & models.
• Modernized installer delivery with automated Inno Setup pipeline reducing manual release effort and improving upgrade reliability.
• Implemented repo & workflow tooling emphasizing security, consistency, and testability; championed developer experience improvements across teams.
• Built and nurtured external & internal user community (AnyBody Managed Model Repository (AMMR), training/webcasts, self-hosted realtime support channels with discourse forums) driving adoption & contribution.
• Expert in biomechanical modeling and simulation.

• Research & development of biomechanical models for human movement & environment interaction.
• Investigated validation methodologies for biomechanical multibody models.

• Embedded software controlling wheelchairs with inter-oral devices.
• ISO 13485 compliance & medical device documentation.

• Embedded software development.
• Wheelchair control with inter-oral interfaces.

• Assistant teacher in mathematics for first-year students.

• R&D of medical equipment.
• Standards & regulations (ISO 60601-1) & Quality Management (ISO 13485).

Focus: Medical signals and systems.